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A New Delivery Approach: Enriching Target Proteins in Outer Membrane Vesicles and Delivering Them to the Cytosol

2023-08-30

A New Delivery Approach: Enriching Target Proteins in Outer Membrane Vesicles and Delivering Them to the Cytosol

Enrichment and delivery of target proteins into the cell cytosol via Outer Membrane Vesicles 

Research

Background

Affinibody recently published “Enrichment and delivery of target proteins into the cell cytosol via Outer Membrane Vesicles” in ACS Applied Materials & Interfaces. Led by Dr. Lichun He, the R&D team investigated protein delivery mechanisms and developed a new approach to delivering proteins into the cytosol.

The approach efficiently enriches target proteins inside OMVs, labels them specifically and delivers them into the cytosol of eukaryotic cells, establishing an OMV-based intracellular protein delivery system.


Three

Key

Advances


01

Bacterial OMVs efficiently enriched target proteins to concentrations up to 62 mg/mL.

02

Small molecules can pass across bacterial OMVs, enabling specific labeling of target proteins inside the vesicles.

03

Bacterial OMVs were successfully used as carriers for intracellular protein delivery.



Proteins are widely used in basic research and biomedicine. Modified proteins serve as labels and reference tools in cell imaging, diagnostics and signaling studies. Protein therapeutics also attract interest because of their high activity, specificity, low toxicity and well-defined biological functions. However, limited membrane permeability generally restricts their action to extracellular receptors. Efficient intracellular delivery could substantially expand therapeutic possibilities, including nanobody-based approaches, and address a wider range of diseases.

Methods developed for intracellular protein delivery include physical techniques, cell-penetrating peptides, liposomes and nanocarriers, but each has limitations. Electroporation, microinjection and nanoneedles can damage membranes and may require complex, low-throughput procedures. Nanocarriers often rely on noncovalent cargo binding and are therefore limited by protein surface properties. Carrier toxicity and persistence must also be considered. Protein purity requirements, complex and costly expression and purification, residual process chemicals and heterogeneous particle sizes further complicate delivery.





Bacterial OMVs are spherical membrane structures, typically 50–250 nm in diameter, released during bacterial growth. They carry lipopolysaccharides, peptidoglycan, membrane and cytosolic components, proteins, toxins and nucleic acids, influencing virulence, horizontal gene transfer, phage infection, metabolite transport and bacterial interactions. OMVs have been used as vaccine adjuvants. Their lipid-and-protein membranes resemble cell membranes and offer potential as drug delivery carriers.

Figure 1. Properties of the OMV Samples

The team characterized OMV morphology, particle size and surface potential, confirming structurally intact, stable vesicles.

Figure 2. Enrichment and Labeling of Target Proteins Inside OMVs


To load target proteins into OMVs, the team constructed a secretory expression plasmid (Figure 2a),directing Spy to the periplasm for packaging into OMVs. Protein analysis showed enrichment up to 62 mg/mL (Figure 2c,d). Fluorescent probes that pass across the vesicle membrane successfully labeled the encapsulated protein (Figure 2e).

Figure 3. CLSM Images of Different Cell Lines Treated with OMVs Containing Labeled Spy T72C



Confocal microscopy showed that simple incubation with OMVs delivered target proteins into the cytosol of multiple cell lines, with delivery efficiencies of approximately 90% (Figure 3).

Figure 4. Confocal Microscopy Results


An initial cytotoxicity assessment found no apparent effect of OMVs on normal cell growth over 72 hours (Figure 4).

The team also investigated delivery mechanisms of E. coli-derived OMVs and found that uptake across multiple cell types occurred through endocytosis (Figure 5).

Figure 5. Incubation with DiI-Labeled OMVs


The authors also investigated delivery mechanisms of E. coli-derived OMVs and confirmed endocytic uptake in multiple cell types (Figure 5).


Figure 6. OMV-Mediated Delivery of Labeled Nanobodies to Different Cell Lines


Confocal images of HeLa, 293T and CX-1 cells after 12 h incubation with OMVs carrying labeled nanobodies. Scale bar: 50 μm.


Nanobodies were packaged into OMVs using the same approach. Confocal microscopy supported nanobody delivery through this system (Figure 6), and ELISA further showed that the delivered nanobodies retained biological activity (Figure 7).

Figure 7. Biological Activity of Pfu Nanobodies Following OMV-Mediated Delivery


Together, these experiments demonstrate efficient enrichment, specific labeling and cytosolic delivery of target proteins using an OMV-based intracellular delivery system.